BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030B01SP1|AL429161
(982 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig717 1632 0.0
>3x_Contig717
Length = 3533
Score = 1632 bits (821), Expect = 0.0
Identities = 854/861 (99%), Gaps = 3/861 (0%)
Strand = Plus / Minus
Query: 28 catttcgtcctggtttcccctgcgacgaagaagatgacgcactaggaccgtctcaaacta 87
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 871 catttcgtcctggtttcccctgcgacgaagaagatgacgcact-ggaccgtctcaaacta 813
Query: 88 ttactcataattggacacacttaatcgccctactcaccttactaaagtacccttcactca 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 ttactcataattggacacacttaatcgccctactcaccttactaaagtacccttcactca 753
Query: 148 ctccttttctcttcctgtcaaagagt-gttttccagacaaaatactaaatcaaactgaaa 206
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 752 ctccttttctcttcctgtcaaagagttgttttccagacaaaatactaaatcaaactgaaa 693
Query: 207 ggttaatttcaatttgattttgagtttgaattataatcgttataattatatcgatcaaaa 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ggttaatttcaatttgattttgagtttgaattataatcgttataattatatcgatcaaaa 633
Query: 267 atcaaatttgtcaagaaaggagataagaaaaaatacagaaaaaattagttcccagtaaga 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 atcaaatttgtcaagaaaggagataagaaaaaatacagaaaaaattagttcccagtaaga 573
Query: 327 tgcgcctagcagtagaagtaaaacgaaggaattgtagtactatccaggatccgtgtcaca 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tgcgcctagcagtagaagtaaaacgaaggaattgtagtactatccaggatccgtgtcaca 513
Query: 387 gctaagcaagggttcttcccgcagttgctattgctacacgaggctttgtaaatacattgc 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gctaagcaagggttcttcccgcagttgctattgctacacgaggctttgtaaatacattgc 453
Query: 447 ataaattatattgtacattacttaaataccctctcttcatttatcacttgagtatgtatg 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ataaattatattgtacattacttaaataccctctcttcatttatcacttgagtatgtatg 393
Query: 507 tgaaatctacaattcccctgcaagtttaacaagattattagactttctggtttttgttgt 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tgaaatctacaattcccctgcaagtttaacaagattattagactttctggtttttgttgt 333
Query: 567 gtctgttggtcggtgtagcctgctatgacgtgaagtagaccgaaaagcaagatcgtgaat 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gtctgttggtcggtgtagcctgctatgacgtgaagtagaccgaaaagcaagatcgtgaat 273
Query: 627 atggtttgagcatttatttcgtagttgttgatgcagagagaggggtagtggtgggaatca 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 atggtttgagcatttatttcgtagttgttgatgcagagagaggggtagtggtgggaatca 213
Query: 687 ggccattgcccggtactaaccttgtgtggtgcatgtatgcggtgcaaatatgcaaatctt 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ggccattgcccggtactaaccttgtgtggtgcatgtatgcggtgcaaatatgcaaatctt 153
Query: 747 tttttcgggaatgttacccggggggatgatggtgtccacgtgactatcacgtggacgttc 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 tttttcgggaatgttacccggggggatgatggtgtccacgtgactatcacgtggacgttc 93
Query: 807 gttagttttttccaagctctcttcactat-tctctttgggatttgtatgtggagggagga 865
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 92 attagttttttccaagctctcttcactatatctctttgggatttgtatgtggagggagga 33
Query: 866 cggtgtagctcaatggacaat 886
|| | ||||| ||||||||||
Sbjct: 32 cgatatagctaaatggacaat 12
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6729
Number of Sequences: 1807
Number of extensions: 6729
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 982
length of database: 10,358,551
effective HSP length: 16
effective length of query: 966
effective length of database: 10,329,639
effective search space: 9978431274
effective search space used: 9978431274
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)